Hi, my name is

Ramin.

PhD Student in Bioinformatics.

I’m a Bioinformatics PhD student at Georgia Institute of Technology, and I love using and developing open-source tools for analyzing biological data.

</> About Me

I’m a Bioinformatics researcher. Here are a few of my skills:
  • Python (scikit-learn, PyTorch, BioPython, PyQt5)
  • R (DESeq2, GOEnrich, WGCNA, ggplot2)
  • Shell
  • Linux
  • Git
  • LaTeX

🔬 Research Experiences

Teaching Assistant - Georgia Institute of Technology
Aug 2024 - Aug 2025
Webpage
Grading assessments such as papers and reports, tests, quizzes, homework. Assisting in the preparation of learning materials Providing students with guidance in interpretation of cours subject matter. Holding office hours with students. Advisor: Professor Storici
Science Writer - Rouyesh Magazine
2022 - Present
Recent Volume
Editorial board member at the Rouyesh scientific magazine. This position involves writing scientific articles across a wide range of subjects to captivate both academic and non-academic audiences.

🎓 Education

Aug 2024 - Aug 2029
PhD in Bioinformatics
School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA
Sep 2020 - Feb 2024
Bachelor of Science in Cell and Molecular Biology
Department of Biology, College of Convergent Sciences and Technologies, Science and Research Branch, Islamic Azad University, Tehran, Iran
GPA: 3.9/4.0
9/July/2023
💬 TOEFL iBT ® Test
Score: 102/120

⚙️ Projects

Arch Linux for Scientists
74 ⭐ Linux Shell Python
Arch Linux for Scientists
Configuration and bootstrap for Arch Linux, customized for scientists and researchers who use Linux as their primary operating system
GitHub
Rofi Noter
27 ⭐ Shell Linux
Rofi Noter
A bash script that facilitates seamless management of notes on Linux.
GitHub
Primer X
R Primer 3 Shiny
Primer X
R-Shiny interface to perform primer quality analysis using the Primer3 library.
GitHub
<Genome/X>
Python Biopython PyQT5
<Genome/X>
GUI user interface for Biopython and other bioinformatics related Python packages.
GitHub
Academ.AI
Python beautifulsoup Universal sentence encoder Spacy
Academ.AI
This Python script is designed to scrape Google Scholar, allowing users to extract research titles and abstracts from any scholar's profile. It also has the capability to generate graphs that visualize the similarities between the research titles.
GitHub
Ankinator
8 ⭐ Python Anki
Ankinator
Extract new words from text files, and create Anki flash cards out of them.
GitHub

📄 Publications

Smart Lipid-Based Nanoparticles in Lung Cancer Treatment: Current Status and Future Directions
Published | Wiley's Advanced Therapeutics (IF=4.74, Q1) | 2023
Enhancing Fetal Anomaly Detection in Ultrasonography Images: A Review of Machine Learning-Based Approaches
Published | MDPI Biomimetics (IF=4.5, Q1) | 2023
Astrovirus: A Challenge for Humans, Animals, and the Environment
Published | Journal of Infectious Diseases & Therapy (IF=2.47) | 2023
Differential Gene Expression Patterns in Niemann-Pick Type C and Tay-Sachs Diseases: Implications for Neurodegenerative Mechanisms
To be submitted | PLoS One Genetics (IF=4.5, Q1) | 2024
Detection of Major Structural Chromosomal Abnormalities in Human Karyotypes using Convolutional Neural Networks
Presented | 1st International Congress of Artificial Intelligence in Medical Sciences | Presenter | 2023
A Systematic Review on the Potential of Circulatory Cell-Free DNA in the Diagnosis of Systemic Lupus Erythematosus Patient
Presented | 16th International Congress of Immunology and Allergy | Presenter | 2023